WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T11B7.4c Sequence Name  T11B7.4c
Length (nt)  2316   Chromosome Location  IV: 8854546-8854577
Chromosome . Primary Identifier  IV Chromosome Location . Start  8854546
Chromosome Location . End  8854577
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T11B7.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35946 ALP-1, isoform c 84.8 771 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00001688
WBRNAi00002262
WBRNAi00053101
WBRNAi00053102
WBRNAi00079868
WBRNAi00018585
WBRNAi00035468

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T11B7.4c 8854546 8854577 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001132 alp-1 T11B7.4 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:T11B7.4c 8854546 8854577 1
CDS:T11B7.4c 8854660 8854768 1
CDS:T11B7.4c 8854899 8855056 1
CDS:T11B7.4c 8856475 8856645 1
CDS:T11B7.4c 8856719 8856822 1
CDS:T11B7.4c 8856876 8856951 1
CDS:T11B7.4c 8857003 8857173 1
CDS:T11B7.4c 8857219 8857445 1
CDS:T11B7.4c 8859482 8859881 1
CDS:T11B7.4c 8860008 8860198 1
CDS:T11B7.4c 8860546 8860723 1
CDS:T11B7.4c 8860966 8861225 1
CDS:T11B7.4c 8861276 8861439 1
CDS:T11B7.4c 8861956 8862030 1

1 Sequence

Length
2316

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T11B7.4c.1 T11B7.4c.1 2399   IV: 8854530-8862097