WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C12.12a.1 Sequence Name  F49C12.12a.1
Length (nt)  562   Chromosome Location  IV: 9320122-9321089
Chromosome . Primary Identifier  IV Chromosome Location . Start  9320122
Chromosome Location . End  9321089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C12.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009881 F49C12.12 F49C12.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C12.12a F49C12.12a 288   IV: 9320391-9320511

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49C12.12a.1 9320122 9321089 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136916   390   IV: 9320122-9320511 Caenorhabditis elegans
Exon136920   120   IV: 9320862-9320981 Caenorhabditis elegans
Exon136922   52   IV: 9321038-9321089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49C12.12a.1 9320122 9321089 -1

1 Sequence

Length
562

1 Sequence Ontology Term

Identifier Name Description
transcript