WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49C12.12a Sequence Name  F49C12.12a
Length (nt)  288   Chromosome Location  IV: 9320391-9320511
Chromosome . Primary Identifier  IV Chromosome Location . Start  9320391
Chromosome Location . End  9320511
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C12.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03372 F49C12.12, isoform a 10.6 95 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00066793
WBRNAi00085567
WBRNAi00047798
WBRNAi00071671
WBRNAi00094205
WBRNAi00094293
WBRNAi00065042
WBRNAi00091110
WBRNAi00091147
WBRNAi00091146
WBRNAi00091149
WBRNAi00091148
WBRNAi00071439
WBRNAi00025555
WBRNAi00008821
WBRNAi00064424

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49C12.12a 9320391 9320511 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009881 F49C12.12 F49C12.12 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49C12.12a 9320391 9320511 -1
CDS:F49C12.12a 9320862 9320981 -1
CDS:F49C12.12a 9321038 9321084 -1

1 Sequence

Length
288

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49C12.12a.1 F49C12.12a.1 562   IV: 9320122-9321089
Transcript:F49C12.12a.2 F49C12.12a.2 528   IV: 9320156-9321089