WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C5.1k.1 Sequence Name  C10C5.1k.1
Length (nt)  5061   Chromosome Location  IV: 9343737-9359587
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343737
Chromosome Location . End  9359587 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C5.1k C10C5.1k 5061   IV: 9343737-9343823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1k.1 9343737 9359587 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon136959   87   IV: 9343737-9343823 Caenorhabditis elegans
Exon136974   134   IV: 9343890-9344023 Caenorhabditis elegans
Exon136986   584   IV: 9344074-9344657 Caenorhabditis elegans
Exon136998   591   IV: 9345003-9345593 Caenorhabditis elegans
Exon137010   583   IV: 9345647-9346229 Caenorhabditis elegans
Exon137022   115   IV: 9346281-9346395 Caenorhabditis elegans
Exon137034   915   IV: 9346454-9347368 Caenorhabditis elegans
Exon137047   131   IV: 9349033-9349163 Caenorhabditis elegans
Exon137059   65   IV: 9350360-9350424 Caenorhabditis elegans
Exon137070   111   IV: 9350476-9350586 Caenorhabditis elegans
Exon137081   54   IV: 9351514-9351567 Caenorhabditis elegans
Exon137092   233   IV: 9351616-9351848 Caenorhabditis elegans
Exon137103   515   IV: 9351897-9352411 Caenorhabditis elegans
Exon137114   104   IV: 9352458-9352561 Caenorhabditis elegans
Exon137125   572   IV: 9352840-9353411 Caenorhabditis elegans
Exon137136   125   IV: 9353466-9353590 Caenorhabditis elegans
Exon137139   142   IV: 9359446-9359587 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C5.1k.1 9343737 9359587 -1

1 Sequence

Length
5061

1 Sequence Ontology Term

Identifier Name Description
transcript