WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C10C5.1k Sequence Name  C10C5.1k
Length (nt)  5061   Chromosome Location  IV: 9343737-9343823
Chromosome . Primary Identifier  IV Chromosome Location . Start  9343737
Chromosome Location . End  9343823
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C5.1k

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49828 PEZO-1, isoform k 191.6 1686 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053618
WBRNAi00018900
WBRNAi00018906

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C10C5.1k 9343737 9343823 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007505 pezo-1 C10C5.1 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:C10C5.1k 9343737 9343823 -1
CDS:C10C5.1k 9343890 9344023 -1
CDS:C10C5.1k 9344074 9344657 -1
CDS:C10C5.1k 9345003 9345593 -1
CDS:C10C5.1k 9345647 9346229 -1
CDS:C10C5.1k 9346281 9346395 -1
CDS:C10C5.1k 9346454 9347368 -1
CDS:C10C5.1k 9349033 9349163 -1
CDS:C10C5.1k 9350360 9350424 -1
CDS:C10C5.1k 9350476 9350586 -1
CDS:C10C5.1k 9351514 9351567 -1
CDS:C10C5.1k 9351616 9351848 -1
CDS:C10C5.1k 9351897 9352411 -1
CDS:C10C5.1k 9352458 9352561 -1
CDS:C10C5.1k 9352840 9353411 -1
CDS:C10C5.1k 9353466 9353590 -1
CDS:C10C5.1k 9359446 9359587 -1

1 Sequence

Length
5061

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C10C5.1k.1 C10C5.1k.1 5061   IV: 9343737-9359587