WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W09C2.3c Sequence Name  W09C2.3c
Length (nt)  3750   Chromosome Location  IV: 9626523-9626582
Chromosome . Primary Identifier  IV Chromosome Location . Start  9626523
Chromosome Location . End  9626582
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09C2.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03800 MCA-1, isoform c 136.8 1249 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00000551
WBRNAi00055018
WBRNAi00026522
WBRNAi00019742
WBRNAi00088723
WBRNAi00088616
WBRNAi00026523
WBRNAi00027503

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W09C2.3c 9626523 9626582 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003151 mca-1 W09C2.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:W09C2.3c 9626523 9626582 -1
CDS:W09C2.3c 9626631 9626761 -1
CDS:W09C2.3c 9626816 9626957 -1
CDS:W09C2.3c 9627005 9628396 -1
CDS:W09C2.3c 9628746 9629981 -1
CDS:W09C2.3c 9630037 9630192 -1
CDS:W09C2.3c 9630237 9630518 -1
CDS:W09C2.3c 9630614 9630790 -1
CDS:W09C2.3c 9631241 9631318 -1
CDS:W09C2.3c 9631552 9631647 -1

1 Sequence

Length
3750

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W09C2.3c.1 W09C2.3c.1 4451   IV: 9625909-9631734