WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F58G6.1 Sequence Name  F58G6.1
Length (nt)  1386   Chromosome Location  IV: 9644687-9645001
Chromosome . Primary Identifier  IV Chromosome Location . Start  9644687
Chromosome Location . End  9645001
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58G6.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03428 AMPH-1 51.9 461 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00084418
WBRNAi00106485
WBRNAi00049056
WBRNAi00016018
WBRNAi00033134
WBRNAi00065623
WBRNAi00098502
WBRNAi00114392

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F58G6.1 9644687 9645001 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010272 amph-1 F58G6.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F58G6.1 9644687 9645001 -1
CDS:F58G6.1 9645345 9645410 -1
CDS:F58G6.1 9645494 9645592 -1
CDS:F58G6.1 9645877 9645969 -1
CDS:F58G6.1 9646019 9646174 -1
CDS:F58G6.1 9646556 9646654 -1
CDS:F58G6.1 9646703 9646789 -1
CDS:F58G6.1 9646946 9647026 -1
CDS:F58G6.1 9647075 9647176 -1
CDS:F58G6.1 9647224 9647340 -1
CDS:F58G6.1 9647476 9647589 -1
CDS:F58G6.1 9647635 9647691 -1

1 Sequence

Length
1386

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F58G6.1.1 F58G6.1.1 1912   IV: 9644294-9647873
Transcript:F58G6.1.2 F58G6.1.2 1780   IV: 9644299-9647697