WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.3a.1 Sequence Name  F25H8.3a.1
Length (nt)  7818   Chromosome Location  IV: 9934206-9953433
Chromosome . Primary Identifier  IV Chromosome Location . Start  9934206
Chromosome Location . End  9953433 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001650 gon-1 F25H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.3a F25H8.3a 6453   IV: 9935067-9935237

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3a.1 9934206 9953433 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139411   1032   IV: 9934206-9935237 Caenorhabditis elegans
Exon139414   197   IV: 9935286-9935482 Caenorhabditis elegans
Exon139418   137   IV: 9935580-9935716 Caenorhabditis elegans
Exon139422   181   IV: 9935765-9935945 Caenorhabditis elegans
Exon139426   352   IV: 9935992-9936343 Caenorhabditis elegans
Exon139430   174   IV: 9936390-9936563 Caenorhabditis elegans
Exon139434   174   IV: 9937037-9937210 Caenorhabditis elegans
Exon139438   171   IV: 9937270-9937440 Caenorhabditis elegans
Exon139442   282   IV: 9938620-9938901 Caenorhabditis elegans
Exon139446   159   IV: 9938946-9939104 Caenorhabditis elegans
Exon139450   486   IV: 9939156-9939641 Caenorhabditis elegans
Exon139454   261   IV: 9939688-9939948 Caenorhabditis elegans
Exon139458   871   IV: 9940006-9940876 Caenorhabditis elegans
Exon139462   442   IV: 9940928-9941369 Caenorhabditis elegans
Exon139466   210   IV: 9941467-9941676 Caenorhabditis elegans
Exon139470   329   IV: 9941727-9942055 Caenorhabditis elegans
Exon139475   149   IV: 9942444-9942592 Caenorhabditis elegans
Exon139479   111   IV: 9942648-9942758 Caenorhabditis elegans
Exon139483   157   IV: 9942809-9942965 Caenorhabditis elegans
Exon139487   95   IV: 9943015-9943109 Caenorhabditis elegans
Exon139491   548   IV: 9943155-9943702 Caenorhabditis elegans
Exon139497   150   IV: 9944733-9944882 Caenorhabditis elegans
Exon139501   67   IV: 9944927-9944993 Caenorhabditis elegans
Exon139505   175   IV: 9945037-9945211 Caenorhabditis elegans
Exon139509   250   IV: 9945262-9945511 Caenorhabditis elegans
Exon139513   63   IV: 9945559-9945621 Caenorhabditis elegans
Exon139518   357   IV: 9945685-9946041 Caenorhabditis elegans
Exon139521   121   IV: 9946374-9946494 Caenorhabditis elegans
Exon139526   69   IV: 9949324-9949392 Caenorhabditis elegans
Exon139536   48   IV: 9953386-9953433 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25H8.3a.1 9934206 9953433 -1

1 Sequence

Length
7818

1 Sequence Ontology Term

Identifier Name Description
transcript