WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H8.3b.1 Sequence Name  F25H8.3b.1
Length (nt)  6498   Chromosome Location  IV: 9935067-9945775
Chromosome . Primary Identifier  IV Chromosome Location . Start  9935067
Chromosome Location . End  9945775 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001650 gon-1 F25H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H8.3b F25H8.3b 6498   IV: 9935067-9935237

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.3b.1 9935067 9945775 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139412   171   IV: 9935067-9935237 Caenorhabditis elegans
Exon139416   197   IV: 9935286-9935482 Caenorhabditis elegans
Exon139420   137   IV: 9935580-9935716 Caenorhabditis elegans
Exon139424   181   IV: 9935765-9935945 Caenorhabditis elegans
Exon139428   352   IV: 9935992-9936343 Caenorhabditis elegans
Exon139432   174   IV: 9936390-9936563 Caenorhabditis elegans
Exon139436   174   IV: 9937037-9937210 Caenorhabditis elegans
Exon139440   171   IV: 9937270-9937440 Caenorhabditis elegans
Exon139444   282   IV: 9938620-9938901 Caenorhabditis elegans
Exon139448   159   IV: 9938946-9939104 Caenorhabditis elegans
Exon139452   486   IV: 9939156-9939641 Caenorhabditis elegans
Exon139456   261   IV: 9939688-9939948 Caenorhabditis elegans
Exon139460   871   IV: 9940006-9940876 Caenorhabditis elegans
Exon139464   442   IV: 9940928-9941369 Caenorhabditis elegans
Exon139468   210   IV: 9941467-9941676 Caenorhabditis elegans
Exon139472   329   IV: 9941727-9942055 Caenorhabditis elegans
Exon139474   45   IV: 9942311-9942355 Caenorhabditis elegans
Exon139477   149   IV: 9942444-9942592 Caenorhabditis elegans
Exon139481   111   IV: 9942648-9942758 Caenorhabditis elegans
Exon139485   157   IV: 9942809-9942965 Caenorhabditis elegans
Exon139489   95   IV: 9943015-9943109 Caenorhabditis elegans
Exon139493   548   IV: 9943155-9943702 Caenorhabditis elegans
Exon139499   150   IV: 9944733-9944882 Caenorhabditis elegans
Exon139503   67   IV: 9944927-9944993 Caenorhabditis elegans
Exon139507   175   IV: 9945037-9945211 Caenorhabditis elegans
Exon139511   250   IV: 9945262-9945511 Caenorhabditis elegans
Exon139515   63   IV: 9945559-9945621 Caenorhabditis elegans
Exon139517   91   IV: 9945685-9945775 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H8.3b.1 9935067 9945775 -1

1 Sequence

Length
6498

1 Sequence Ontology Term

Identifier Name Description
transcript