WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14G10.2b.1 Sequence Name  T14G10.2b.1
Length (nt)  4928   Chromosome Location  IV: 10164288-10174341
Chromosome . Primary Identifier  IV Chromosome Location . Start  10164288
Chromosome Location . End  10174341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2b T14G10.2b 3936   IV: 10165839-10165852

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2b.1 10164288 10174341 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140172   359   IV: 10164288-10164646 Caenorhabditis elegans
Exon140183   314   IV: 10164696-10165009 Caenorhabditis elegans
Exon140190   139   IV: 10165395-10165533 Caenorhabditis elegans
Exon140198   183   IV: 10165670-10165852 Caenorhabditis elegans
Exon140206   156   IV: 10165965-10166120 Caenorhabditis elegans
Exon140216   237   IV: 10166468-10166704 Caenorhabditis elegans
Exon140226   229   IV: 10167020-10167248 Caenorhabditis elegans
Exon140236   277   IV: 10167299-10167575 Caenorhabditis elegans
Exon140246   240   IV: 10167623-10167862 Caenorhabditis elegans
Exon140256   201   IV: 10167908-10168108 Caenorhabditis elegans
Exon140266   739   IV: 10168165-10168903 Caenorhabditis elegans
Exon140278   1357   IV: 10168952-10170308 Caenorhabditis elegans
Exon140286   108   IV: 10170740-10170847 Caenorhabditis elegans
Exon140296   76   IV: 10171669-10171744 Caenorhabditis elegans
Exon140302   84   IV: 10173261-10173344 Caenorhabditis elegans
Exon140308   128   IV: 10174033-10174160 Caenorhabditis elegans
Exon140318   101   IV: 10174241-10174341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.2b.1 10164288 10174341 -1

1 Sequence

Length
4928

1 Sequence Ontology Term

Identifier Name Description
transcript