WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E8.1g.2 Sequence Name  K11E8.1g.2
Length (nt)  2538   Chromosome Location  IV: 10324255-10340566
Chromosome . Primary Identifier  IV Chromosome Location . Start  10324255
Chromosome Location . End  10340566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E8.1g.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006779 unc-43 K11E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E8.1g K11E8.1g 1563   IV: 10324996-10325125

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1g.2 10324255 10340566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140704   871   IV: 10324255-10325125 Caenorhabditis elegans
Exon140731   109   IV: 10325970-10326078 Caenorhabditis elegans
Exon140754   92   IV: 10326274-10326365 Caenorhabditis elegans
Exon140775   76   IV: 10326569-10326644 Caenorhabditis elegans
Exon140792   114   IV: 10327602-10327715 Caenorhabditis elegans
Exon140813   105   IV: 10329097-10329201 Caenorhabditis elegans
Exon140835   43   IV: 10334127-10334169 Caenorhabditis elegans
Exon140854   84   IV: 10337632-10337715 Caenorhabditis elegans
Exon140868   123   IV: 10337797-10337919 Caenorhabditis elegans
Exon140882   95   IV: 10337971-10338065 Caenorhabditis elegans
Exon140896   184   IV: 10338114-10338297 Caenorhabditis elegans
Exon140910   73   IV: 10338486-10338558 Caenorhabditis elegans
Exon140930   66   IV: 10338857-10338922 Caenorhabditis elegans
Exon140947   210   IV: 10338973-10339182 Caenorhabditis elegans
Exon140965   211   IV: 10340110-10340320 Caenorhabditis elegans
Exon140982   82   IV: 10340485-10340566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1g.2 10324255 10340566 -1

1 Sequence

Length
2538

1 Sequence Ontology Term

Identifier Name Description
transcript