WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E8.1d.2 Sequence Name  K11E8.1d.2
Length (nt)  2501   Chromosome Location  IV: 10324255-10348971
Chromosome . Primary Identifier  IV Chromosome Location . Start  10324255
Chromosome Location . End  10348971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E8.1d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006779 unc-43 K11E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E8.1d K11E8.1d 1449   IV: 10324996-10325125

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1d.2 10324255 10348971 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140705   871   IV: 10324255-10325125 Caenorhabditis elegans
Exon140725   109   IV: 10325970-10326078 Caenorhabditis elegans
Exon140748   92   IV: 10326274-10326365 Caenorhabditis elegans
Exon140769   76   IV: 10326569-10326644 Caenorhabditis elegans
Exon140809   105   IV: 10329097-10329201 Caenorhabditis elegans
Exon140829   43   IV: 10334127-10334169 Caenorhabditis elegans
Exon140848   84   IV: 10337632-10337715 Caenorhabditis elegans
Exon140862   123   IV: 10337797-10337919 Caenorhabditis elegans
Exon140876   95   IV: 10337971-10338065 Caenorhabditis elegans
Exon140890   184   IV: 10338114-10338297 Caenorhabditis elegans
Exon140904   73   IV: 10338486-10338558 Caenorhabditis elegans
Exon140924   66   IV: 10338857-10338922 Caenorhabditis elegans
Exon140941   210   IV: 10338973-10339182 Caenorhabditis elegans
Exon140959   211   IV: 10340110-10340320 Caenorhabditis elegans
Exon140974   72   IV: 10340485-10340556 Caenorhabditis elegans
Exon140991   87   IV: 10348885-10348971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1d.2 10324255 10348971 -1

1 Sequence

Length
2501

1 Sequence Ontology Term

Identifier Name Description
transcript