WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E8.1g.1 Sequence Name  K11E8.1g.1
Length (nt)  2603   Chromosome Location  IV: 10324256-10348960
Chromosome . Primary Identifier  IV Chromosome Location . Start  10324256
Chromosome Location . End  10348960 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E8.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006779 unc-43 K11E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E8.1g K11E8.1g 1563   IV: 10324996-10325125

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1g.1 10324256 10348960 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140706   870   IV: 10324256-10325125 Caenorhabditis elegans
Exon140730   109   IV: 10325970-10326078 Caenorhabditis elegans
Exon140753   92   IV: 10326274-10326365 Caenorhabditis elegans
Exon140774   76   IV: 10326569-10326644 Caenorhabditis elegans
Exon140791   114   IV: 10327602-10327715 Caenorhabditis elegans
Exon140812   105   IV: 10329097-10329201 Caenorhabditis elegans
Exon140834   43   IV: 10334127-10334169 Caenorhabditis elegans
Exon140853   84   IV: 10337632-10337715 Caenorhabditis elegans
Exon140867   123   IV: 10337797-10337919 Caenorhabditis elegans
Exon140881   95   IV: 10337971-10338065 Caenorhabditis elegans
Exon140895   184   IV: 10338114-10338297 Caenorhabditis elegans
Exon140909   73   IV: 10338486-10338558 Caenorhabditis elegans
Exon140929   66   IV: 10338857-10338922 Caenorhabditis elegans
Exon140946   210   IV: 10338973-10339182 Caenorhabditis elegans
Exon140964   211   IV: 10340110-10340320 Caenorhabditis elegans
Exon140977   72   IV: 10340485-10340556 Caenorhabditis elegans
Exon140988   76   IV: 10348885-10348960 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1g.1 10324256 10348960 -1

1 Sequence

Length
2603

1 Sequence Ontology Term

Identifier Name Description
transcript