WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E8.1f.2 Sequence Name  K11E8.1f.2
Length (nt)  2498   Chromosome Location  IV: 10324285-10340562
Chromosome . Primary Identifier  IV Chromosome Location . Start  10324285
Chromosome Location . End  10340562 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E8.1f.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006779 unc-43 K11E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E8.1f K11E8.1f 1557   IV: 10324996-10325125

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11E8.1f.2 10324285 10340562 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140708   841   IV: 10324285-10325125 Caenorhabditis elegans
Exon140729   109   IV: 10325970-10326078 Caenorhabditis elegans
Exon140752   92   IV: 10326274-10326365 Caenorhabditis elegans
Exon140773   76   IV: 10326569-10326644 Caenorhabditis elegans
Exon140790   114   IV: 10327602-10327715 Caenorhabditis elegans
Exon140804   99   IV: 10329097-10329195 Caenorhabditis elegans
Exon140833   43   IV: 10334127-10334169 Caenorhabditis elegans
Exon140852   84   IV: 10337632-10337715 Caenorhabditis elegans
Exon140866   123   IV: 10337797-10337919 Caenorhabditis elegans
Exon140880   95   IV: 10337971-10338065 Caenorhabditis elegans
Exon140894   184   IV: 10338114-10338297 Caenorhabditis elegans
Exon140908   73   IV: 10338486-10338558 Caenorhabditis elegans
Exon140928   66   IV: 10338857-10338922 Caenorhabditis elegans
Exon140945   210   IV: 10338973-10339182 Caenorhabditis elegans
Exon140963   211   IV: 10340110-10340320 Caenorhabditis elegans
Exon140981   78   IV: 10340485-10340562 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11E8.1f.2 10324285 10340562 -1

1 Sequence

Length
2498

1 Sequence Ontology Term

Identifier Name Description
transcript