WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E8.1r.1 Sequence Name  K11E8.1r.1
Length (nt)  2046   Chromosome Location  IV: 10324996-10350217
Chromosome . Primary Identifier  IV Chromosome Location . Start  10324996
Chromosome Location . End  10350217 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E8.1r.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006779 unc-43 K11E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E8.1r K11E8.1r 2046   IV: 10324996-10325125

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11E8.1r.1 10324996 10350217 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140722   130   IV: 10324996-10325125 Caenorhabditis elegans
Exon140742   109   IV: 10325970-10326078 Caenorhabditis elegans
Exon140764   92   IV: 10326274-10326365 Caenorhabditis elegans
Exon140784   76   IV: 10326569-10326644 Caenorhabditis elegans
Exon140799   114   IV: 10327602-10327715 Caenorhabditis elegans
Exon140818   105   IV: 10329097-10329201 Caenorhabditis elegans
Exon140839   43   IV: 10334127-10334169 Caenorhabditis elegans
Exon140846   153   IV: 10336112-10336264 Caenorhabditis elegans
Exon140860   84   IV: 10337632-10337715 Caenorhabditis elegans
Exon140874   123   IV: 10337797-10337919 Caenorhabditis elegans
Exon140888   95   IV: 10337971-10338065 Caenorhabditis elegans
Exon140902   184   IV: 10338114-10338297 Caenorhabditis elegans
Exon140916   73   IV: 10338486-10338558 Caenorhabditis elegans
Exon140936   66   IV: 10338857-10338922 Caenorhabditis elegans
Exon140953   210   IV: 10338973-10339182 Caenorhabditis elegans
Exon140969   211   IV: 10340110-10340320 Caenorhabditis elegans
Exon140979   72   IV: 10340485-10340556 Caenorhabditis elegans
Exon140990   81   IV: 10348885-10348965 Caenorhabditis elegans
Exon140993   25   IV: 10350193-10350217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11E8.1r.1 10324996 10350217 -1

1 Sequence

Length
2046

1 Sequence Ontology Term

Identifier Name Description
transcript