WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11A8.7b.1 Sequence Name  R11A8.7b.1
Length (nt)  8416   Chromosome Location  IV: 10374903-10387318
Chromosome . Primary Identifier  IV Chromosome Location . Start  10374903
Chromosome Location . End  10387318 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011240 mask-1 R11A8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11A8.7b R11A8.7b 7797   IV: 10374946-10375059

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.7b.1 10374903 10387318 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141076   157   IV: 10374903-10375059 Caenorhabditis elegans
Exon141083   168   IV: 10375110-10375277 Caenorhabditis elegans
Exon141090   170   IV: 10375324-10375493 Caenorhabditis elegans
Exon141097   119   IV: 10375870-10375988 Caenorhabditis elegans
Exon141104   125   IV: 10376326-10376450 Caenorhabditis elegans
Exon141111   390   IV: 10376506-10376895 Caenorhabditis elegans
Exon141118   476   IV: 10377480-10377955 Caenorhabditis elegans
Exon141125   607   IV: 10378006-10378612 Caenorhabditis elegans
Exon141135   131   IV: 10378669-10378799 Caenorhabditis elegans
Exon141139   512   IV: 10379249-10379760 Caenorhabditis elegans
Exon141146   290   IV: 10379905-10380194 Caenorhabditis elegans
Exon141153   172   IV: 10380496-10380667 Caenorhabditis elegans
Exon141161   132   IV: 10381447-10381578 Caenorhabditis elegans
Exon141174   149   IV: 10381659-10381807 Caenorhabditis elegans
Exon141178   656   IV: 10381861-10382516 Caenorhabditis elegans
Exon141189   301   IV: 10382569-10382869 Caenorhabditis elegans
Exon141200   900   IV: 10382925-10383824 Caenorhabditis elegans
Exon141210   304   IV: 10384030-10384333 Caenorhabditis elegans
Exon141221   330   IV: 10384400-10384729 Caenorhabditis elegans
Exon141230   629   IV: 10384777-10385405 Caenorhabditis elegans
Exon141241   519   IV: 10385457-10385975 Caenorhabditis elegans
Exon141252   177   IV: 10386027-10386203 Caenorhabditis elegans
Exon141263   329   IV: 10386272-10386600 Caenorhabditis elegans
Exon141282   673   IV: 10386646-10387318 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11A8.7b.1 10374903 10387318 1

1 Sequence

Length
8416

1 Sequence Ontology Term

Identifier Name Description
transcript