WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11A8.7i.1 Sequence Name  R11A8.7i.1
Length (nt)  7815   Chromosome Location  IV: 10374946-10386742
Chromosome . Primary Identifier  IV Chromosome Location . Start  10374946
Chromosome Location . End  10386742 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.7i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011240 mask-1 R11A8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11A8.7i R11A8.7i 7815   IV: 10374946-10375059

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R11A8.7i.1 10374946 10386742 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon141079   114   IV: 10374946-10375059 Caenorhabditis elegans
Exon141087   168   IV: 10375110-10375277 Caenorhabditis elegans
Exon141094   170   IV: 10375324-10375493 Caenorhabditis elegans
Exon141101   119   IV: 10375870-10375988 Caenorhabditis elegans
Exon141108   125   IV: 10376326-10376450 Caenorhabditis elegans
Exon141115   390   IV: 10376506-10376895 Caenorhabditis elegans
Exon141122   476   IV: 10377480-10377955 Caenorhabditis elegans
Exon141129   607   IV: 10378006-10378612 Caenorhabditis elegans
Exon141132   143   IV: 10378657-10378799 Caenorhabditis elegans
Exon141143   512   IV: 10379249-10379760 Caenorhabditis elegans
Exon141150   290   IV: 10379905-10380194 Caenorhabditis elegans
Exon141157   172   IV: 10380496-10380667 Caenorhabditis elegans
Exon141165   132   IV: 10381447-10381578 Caenorhabditis elegans
Exon141172   155   IV: 10381653-10381807 Caenorhabditis elegans
Exon141184   656   IV: 10381861-10382516 Caenorhabditis elegans
Exon141197   301   IV: 10382569-10382869 Caenorhabditis elegans
Exon141208   900   IV: 10382925-10383824 Caenorhabditis elegans
Exon141216   304   IV: 10384030-10384333 Caenorhabditis elegans
Exon141227   330   IV: 10384400-10384729 Caenorhabditis elegans
Exon141238   629   IV: 10384777-10385405 Caenorhabditis elegans
Exon141249   519   IV: 10385457-10385975 Caenorhabditis elegans
Exon141260   177   IV: 10386027-10386203 Caenorhabditis elegans
Exon141271   329   IV: 10386272-10386600 Caenorhabditis elegans
Exon141276   97   IV: 10386646-10386742 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R11A8.7i.1 10374946 10386742 1

1 Sequence

Length
7815

1 Sequence Ontology Term

Identifier Name Description
transcript