WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B9.6a.1 Sequence Name  T25B9.6a.1
Length (nt)  1935   Chromosome Location  IV: 10758149-10760795
Chromosome . Primary Identifier  IV Chromosome Location . Start  10758149
Chromosome Location . End  10760795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B9.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012012 T25B9.6 T25B9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B9.6a T25B9.6a 1809   IV: 10758203-10758270

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.6a.1 10758149 10760795 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142378   122   IV: 10758149-10758270 Caenorhabditis elegans
Exon142380   51   IV: 10758315-10758365 Caenorhabditis elegans
Exon142382   331   IV: 10758459-10758789 Caenorhabditis elegans
Exon142385   198   IV: 10758960-10759157 Caenorhabditis elegans
Exon142386   608   IV: 10759204-10759811 Caenorhabditis elegans
Exon142388   134   IV: 10759861-10759994 Caenorhabditis elegans
Exon142390   252   IV: 10760040-10760291 Caenorhabditis elegans
Exon142392   86   IV: 10760507-10760592 Caenorhabditis elegans
Exon142395   153   IV: 10760643-10760795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B9.6a.1 10758149 10760795 1

1 Sequence

Length
1935

1 Sequence Ontology Term

Identifier Name Description
transcript