WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.4c.1 Sequence Name  F36H1.4c.1
Length (nt)  1869   Chromosome Location  IV: 11054308-11063614
Chromosome . Primary Identifier  IV Chromosome Location . Start  11054308
Chromosome Location . End  11063614 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4c F36H1.4c 1272   IV: 11057814-11057868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4c.1 11054308 11063614 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143358   61   IV: 11054308-11054368 Caenorhabditis elegans
Exon143366   68   IV: 11057670-11057737 Caenorhabditis elegans
Exon143374   80   IV: 11057789-11057868 Caenorhabditis elegans
Exon143382   246   IV: 11059399-11059644 Caenorhabditis elegans
Exon143396   165   IV: 11059693-11059857 Caenorhabditis elegans
Exon143407   82   IV: 11060409-11060490 Caenorhabditis elegans
Exon143414   82   IV: 11060538-11060619 Caenorhabditis elegans
Exon143432   89   IV: 11061068-11061156 Caenorhabditis elegans
Exon143443   276   IV: 11061624-11061899 Caenorhabditis elegans
Exon143454   112   IV: 11061947-11062058 Caenorhabditis elegans
Exon143465   87   IV: 11062114-11062200 Caenorhabditis elegans
Exon143478   521   IV: 11063094-11063614 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4c.1 11054308 11063614 1

1 Sequence

Length
1869

1 Sequence Ontology Term

Identifier Name Description
transcript