WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G4.3.2 Sequence Name  F01G4.3.2
Length (nt)  4839   Chromosome Location  IV: 11134658-11142364
Chromosome . Primary Identifier  IV Chromosome Location . Start  11134658
Chromosome Location . End  11142364 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G4.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008502 skih-2 F01G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G4.3 F01G4.3 3801   IV: 11135673-11135876

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01G4.3.2 11134658 11142364 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143646   1219   IV: 11134658-11135876 Caenorhabditis elegans
Exon143649   135   IV: 11135928-11136062 Caenorhabditis elegans
Exon143651   333   IV: 11136111-11136443 Caenorhabditis elegans
Exon143654   226   IV: 11136937-11137162 Caenorhabditis elegans
Exon143656   212   IV: 11137215-11137426 Caenorhabditis elegans
Exon143658   81   IV: 11137475-11137555 Caenorhabditis elegans
Exon143660   525   IV: 11138087-11138611 Caenorhabditis elegans
Exon143662   126   IV: 11139123-11139248 Caenorhabditis elegans
Exon143664   392   IV: 11139296-11139687 Caenorhabditis elegans
Exon143666   304   IV: 11140160-11140463 Caenorhabditis elegans
Exon143668   253   IV: 11140513-11140765 Caenorhabditis elegans
Exon143670   146   IV: 11141144-11141289 Caenorhabditis elegans
Exon143672   413   IV: 11141337-11141749 Caenorhabditis elegans
Exon143674   179   IV: 11141796-11141974 Caenorhabditis elegans
Exon143676   177   IV: 11142023-11142199 Caenorhabditis elegans
Exon143678   118   IV: 11142247-11142364 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01G4.3.2 11134658 11142364 -1

1 Sequence

Length
4839

1 Sequence Ontology Term

Identifier Name Description
transcript