WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07H5.2a Sequence Name  R07H5.2a
Length (nt)  1941   Chromosome Location  IV: 11179645-11179811
Chromosome . Primary Identifier  IV Chromosome Location . Start  11179645
Chromosome Location . End  11179811
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07H5.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47933 CPT-2, isoform a 72.5 646 Caenorhabditis elegans
 

Other

35 RNAi

WormBase ID
WBRNAi00051509
WBRNAi00017569
WBRNAi00076604
WBRNAi00034727
WBRNAi00072855
WBRNAi00072856
WBRNAi00092982
WBRNAi00102594
WBRNAi00105646
WBRNAi00105648
WBRNAi00105647
WBRNAi00105650
WBRNAi00105649
WBRNAi00105652
WBRNAi00105651
WBRNAi00105654
WBRNAi00105653
WBRNAi00105656
WBRNAi00105655
WBRNAi00105658
WBRNAi00105657
WBRNAi00105660
WBRNAi00105659
WBRNAi00105662
WBRNAi00105661
WBRNAi00105664
WBRNAi00105663
WBRNAi00105666
WBRNAi00105665
WBRNAi00105668

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07H5.2a 11179645 11179811 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011122 cpt-2 R07H5.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07H5.2a 11179645 11179811 1
CDS:R07H5.2a 11179867 11180122 1
CDS:R07H5.2a 11180398 11180531 1
CDS:R07H5.2a 11180580 11180709 1
CDS:R07H5.2a 11180761 11180920 1
CDS:R07H5.2a 11180969 11181113 1
CDS:R07H5.2a 11181160 11181236 1
CDS:R07H5.2a 11181284 11181704 1
CDS:R07H5.2a 11181757 11182123 1
CDS:R07H5.2a 11182733 11182816 1

1 Sequence

Length
1941

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07H5.2a.1 R07H5.2a.1 2133   IV: 11179645-11183008