WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01G1.1e.1 Sequence Name  T01G1.1e.1
Length (nt)  4577   Chromosome Location  IV: 11341325-11359869
Chromosome . Primary Identifier  IV Chromosome Location . Start  11341325
Chromosome Location . End  11359869 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G1.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002223 klp-12 T01G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01G1.1e T01G1.1e 4386   IV: 11341443-11341553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01G1.1e.1 11341325 11359869 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144195   229   IV: 11341325-11341553 Caenorhabditis elegans
Exon144204   593   IV: 11341609-11342201 Caenorhabditis elegans
Exon144208   207   IV: 11342291-11342497 Caenorhabditis elegans
Exon144212   137   IV: 11342900-11343036 Caenorhabditis elegans
Exon144219   178   IV: 11345884-11346061 Caenorhabditis elegans
Exon144222   96   IV: 11346111-11346206 Caenorhabditis elegans
Exon144225   88   IV: 11346529-11346616 Caenorhabditis elegans
Exon144228   76   IV: 11350856-11350931 Caenorhabditis elegans
Exon144231   107   IV: 11351082-11351188 Caenorhabditis elegans
Exon144241   138   IV: 11355415-11355552 Caenorhabditis elegans
Exon144244   719   IV: 11355997-11356715 Caenorhabditis elegans
Exon144247   285   IV: 11356765-11357049 Caenorhabditis elegans
Exon144250   403   IV: 11357276-11357678 Caenorhabditis elegans
Exon144253   268   IV: 11357749-11358016 Caenorhabditis elegans
Exon144256   116   IV: 11358067-11358182 Caenorhabditis elegans
Exon144259   285   IV: 11358230-11358514 Caenorhabditis elegans
Exon144262   324   IV: 11358561-11358884 Caenorhabditis elegans
Exon144265   223   IV: 11359495-11359717 Caenorhabditis elegans
Exon144268   105   IV: 11359765-11359869 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01G1.1e.1 11341325 11359869 -1

1 Sequence

Length
4577

1 Sequence Ontology Term

Identifier Name Description
transcript