WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01G1.1c.1 Sequence Name  T01G1.1c.1
Length (nt)  4927   Chromosome Location  IV: 11341326-11359863
Chromosome . Primary Identifier  IV Chromosome Location . Start  11341326
Chromosome Location . End  11359863 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G1.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002223 klp-12 T01G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01G1.1c T01G1.1c 4743   IV: 11341443-11341553

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01G1.1c.1 11341326 11359863 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144196   228   IV: 11341326-11341553 Caenorhabditis elegans
Exon144202   593   IV: 11341609-11342201 Caenorhabditis elegans
Exon144206   207   IV: 11342291-11342497 Caenorhabditis elegans
Exon144211   137   IV: 11342900-11343036 Caenorhabditis elegans
Exon144214   174   IV: 11343392-11343565 Caenorhabditis elegans
Exon144216   183   IV: 11344365-11344547 Caenorhabditis elegans
Exon144218   178   IV: 11345884-11346061 Caenorhabditis elegans
Exon144221   96   IV: 11346111-11346206 Caenorhabditis elegans
Exon144224   88   IV: 11346529-11346616 Caenorhabditis elegans
Exon144227   76   IV: 11350856-11350931 Caenorhabditis elegans
Exon144230   107   IV: 11351082-11351188 Caenorhabditis elegans
Exon144240   138   IV: 11355415-11355552 Caenorhabditis elegans
Exon144243   719   IV: 11355997-11356715 Caenorhabditis elegans
Exon144246   285   IV: 11356765-11357049 Caenorhabditis elegans
Exon144249   403   IV: 11357276-11357678 Caenorhabditis elegans
Exon144252   268   IV: 11357749-11358016 Caenorhabditis elegans
Exon144255   116   IV: 11358067-11358182 Caenorhabditis elegans
Exon144258   285   IV: 11358230-11358514 Caenorhabditis elegans
Exon144261   324   IV: 11358561-11358884 Caenorhabditis elegans
Exon144264   223   IV: 11359495-11359717 Caenorhabditis elegans
Exon144267   99   IV: 11359765-11359863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01G1.1c.1 11341326 11359863 -1

1 Sequence

Length
4927

1 Sequence Ontology Term

Identifier Name Description
transcript