WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B3.2b.1 Sequence Name  T22B3.2b.1
Length (nt)  3268   Chromosome Location  IV: 11704246-11708259
Chromosome . Primary Identifier  IV Chromosome Location . Start  11704246
Chromosome Location . End  11708259 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B3.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011910 alg-3 T22B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B3.2b T22B3.2b 3108   IV: 11704365-11704419

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B3.2b.1 11704246 11708259 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145128   45   IV: 11704246-11704290 Caenorhabditis elegans
Exon145130   80   IV: 11704340-11704419 Caenorhabditis elegans
Exon145132   167   IV: 11704694-11704860 Caenorhabditis elegans
Exon145136   173   IV: 11704910-11705082 Caenorhabditis elegans
Exon145139   885   IV: 11705128-11706012 Caenorhabditis elegans
Exon145142   217   IV: 11706065-11706281 Caenorhabditis elegans
Exon145145   508   IV: 11706328-11706835 Caenorhabditis elegans
Exon145148   263   IV: 11706886-11707148 Caenorhabditis elegans
Exon145151   125   IV: 11707193-11707317 Caenorhabditis elegans
Exon145154   498   IV: 11707362-11707859 Caenorhabditis elegans
Exon145157   125   IV: 11707906-11708030 Caenorhabditis elegans
Exon145159   182   IV: 11708078-11708259 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B3.2b.1 11704246 11708259 1

1 Sequence

Length
3268

1 Sequence Ontology Term

Identifier Name Description
transcript