WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T22B3.2b Sequence Name  T22B3.2b
Length (nt)  3108   Chromosome Location  IV: 11704365-11704419
Chromosome . Primary Identifier  IV Chromosome Location . Start  11704365
Chromosome Location . End  11704419
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B3.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06488 ALG-3, isoform b 114.9 1035 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001900
WBRNAi00053790
WBRNAi00019004

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T22B3.2b 11704365 11704419 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011910 alg-3 T22B3.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:T22B3.2b 11704365 11704419 1
CDS:T22B3.2b 11704694 11704860 1
CDS:T22B3.2b 11704910 11705082 1
CDS:T22B3.2b 11705128 11706012 1
CDS:T22B3.2b 11706065 11706281 1
CDS:T22B3.2b 11706328 11706835 1
CDS:T22B3.2b 11706886 11707148 1
CDS:T22B3.2b 11707193 11707317 1
CDS:T22B3.2b 11707362 11707859 1
CDS:T22B3.2b 11707906 11708030 1
CDS:T22B3.2b 11708078 11708169 1

1 Sequence

Length
3108

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T22B3.2b.1 T22B3.2b.1 3268   IV: 11704246-11708259
Transcript:T22B3.2b.2 T22B3.2b.2 3225   IV: 11704338-11708259