WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K01A6.2a Sequence Name  K01A6.2a
Length (nt)  3165   Chromosome Location  IV: 11715090-11715108
Chromosome . Primary Identifier  IV Chromosome Location . Start  11715090
Chromosome Location . End  11715108
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A6.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43560 MAGI-1, isoform a 115.2 1054 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00000727
WBRNAi00049593
WBRNAi00049594
WBRNAi00016376
WBRNAi00016377
WBRNAi00077323
WBRNAi00077324
WBRNAi00092153

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K01A6.2a 11715090 11715108 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010444 magi-1 K01A6.2 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:K01A6.2a 11715090 11715108 1
CDS:K01A6.2a 11715156 11715220 1
CDS:K01A6.2a 11715397 11715463 1
CDS:K01A6.2a 11715984 11716221 1
CDS:K01A6.2a 11716267 11716463 1
CDS:K01A6.2a 11716860 11716979 1
CDS:K01A6.2a 11722520 11722652 1
CDS:K01A6.2a 11722990 11723085 1
CDS:K01A6.2a 11724956 11725094 1
CDS:K01A6.2a 11725145 11725426 1
CDS:K01A6.2a 11726353 11727006 1
CDS:K01A6.2a 11727056 11727937 1
CDS:K01A6.2a 11728371 11728517 1
CDS:K01A6.2a 11728872 11728997 1

1 Sequence

Length
3165

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K01A6.2a.1 K01A6.2a.1 3499   IV: 11715039-11729280