WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T12G3.1a Sequence Name  T12G3.1a
Length (nt)  2082   Chromosome Location  IV: 12034282-12034450
Chromosome . Primary Identifier  IV Chromosome Location . Start  12034282
Chromosome Location . End  12034450
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12G3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37554 SQST-1, isoform a 76.6 693 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00053225
WBRNAi00018644
WBRNAi00033299
WBRNAi00114688
WBRNAi00113609

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T12G3.1a 12034282 12034450 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011737 sqst-1 T12G3.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:T12G3.1a 12034282 12034450 1
CDS:T12G3.1a 12034760 12036564 1
CDS:T12G3.1a 12036613 12036720 1

1 Sequence

Length
2082

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12G3.1a.1 T12G3.1a.1 2253   IV: 12034282-12036891