WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12G3.1b.1 Sequence Name  T12G3.1b.1
Length (nt)  1866   Chromosome Location  IV: 12034807-12036720
Chromosome . Primary Identifier  IV Chromosome Location . Start  12034807
Chromosome Location . End  12036720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12G3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011737 sqst-1 T12G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12G3.1b T12G3.1b 1866   IV: 12034807-12036564

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12G3.1b.1 12034807 12036720 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146170   1758   IV: 12034807-12036564 Caenorhabditis elegans
Exon146171   108   IV: 12036613-12036720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12G3.1b.1 12034807 12036720 1

1 Sequence

Length
1866

1 Sequence Ontology Term

Identifier Name Description
transcript