WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M18.5 Sequence Name  M18.5
Length (nt)  3405   Chromosome Location  IV: 12115202-12115263
Chromosome . Primary Identifier  IV Chromosome Location . Start  12115202
Chromosome Location . End  12115263
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M18.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23880 DDB-1 125.7 1134 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00051006
WBRNAi00009016
WBRNAi00025999
WBRNAi00082407
WBRNAi00077607
WBRNAi00082676
WBRNAi00080764
WBRNAi00084870
WBRNAi00034469
WBRNAi00071480
WBRNAi00077606
WBRNAi00080751
WBRNAi00080754
WBRNAi00080767
WBRNAi00077608
WBRNAi00077609
WBRNAi00080748
WBRNAi00080760
WBRNAi00077610
WBRNAi00112100

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M18.5 12115202 12115263 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010890 ddb-1 M18.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:M18.5 12115202 12115263 -1
CDS:M18.5 12115319 12115424 -1
CDS:M18.5 12115476 12116292 -1
CDS:M18.5 12116354 12116480 -1
CDS:M18.5 12116790 12117013 -1
CDS:M18.5 12117353 12117687 -1
CDS:M18.5 12118299 12119000 -1
CDS:M18.5 12119049 12119373 -1
CDS:M18.5 12119863 12120064 -1
CDS:M18.5 12120109 12120397 -1
CDS:M18.5 12120857 12120999 -1
CDS:M18.5 12121052 12121124 -1

1 Sequence

Length
3405

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M18.5.1 M18.5.1 3838   IV: 12114810-12121165