WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C42C1.7a Sequence Name  C42C1.7a
Length (nt)  2097   Chromosome Location  IV: 12293358-12293603
Chromosome . Primary Identifier  IV Chromosome Location . Start  12293358
Chromosome Location . End  12293603
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46875 OAC-59, isoform a 80.8 698 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00042346
WBRNAi00011864

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C42C1.7a 12293358 12293603 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016585 oac-59 C42C1.7 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C42C1.7a 12293358 12293603 -1
CDS:C42C1.7a 12297822 12298032 -1
CDS:C42C1.7a 12298082 12298193 -1
CDS:C42C1.7a 12298650 12298770 -1
CDS:C42C1.7a 12298815 12298921 -1
CDS:C42C1.7a 12298968 12299131 -1
CDS:C42C1.7a 12299179 12299242 -1
CDS:C42C1.7a 12299809 12299975 -1
CDS:C42C1.7a 12300054 12300426 -1
CDS:C42C1.7a 12300517 12300920 -1
CDS:C42C1.7a 12301130 12301257 -1

1 Sequence

Length
2097

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C42C1.7a.1 C42C1.7a.1 2226   IV: 12293233-12301261