WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC518.1f Sequence Name  ZC518.1f
Length (nt)  1491   Chromosome Location  IV: 12349998-12350087
Chromosome . Primary Identifier  IV Chromosome Location . Start  12349998
Chromosome Location . End  12350087
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC518.1f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49895 BEST-22, isoform f 57.0 496 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00058998
WBRNAi00021746
WBRNAi00038095

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:ZC518.1f 12349998 12350087 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013921 best-22 ZC518.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:ZC518.1f 12349998 12350087 1
CDS:ZC518.1f 12350655 12350743 1
CDS:ZC518.1f 12350790 12350927 1
CDS:ZC518.1f 12351261 12351660 1
CDS:ZC518.1f 12351714 12351797 1
CDS:ZC518.1f 12352168 12352311 1
CDS:ZC518.1f 12353144 12353295 1
CDS:ZC518.1f 12353343 12353418 1
CDS:ZC518.1f 12353686 12353804 1
CDS:ZC518.1f 12353897 12353929 1
CDS:ZC518.1f 12354096 12354157 1
CDS:ZC518.1f 12355390 12355493 1

1 Sequence

Length
1491

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC518.1f.1 ZC518.1f.1 1780   IV: 12349940-12355724