WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E7.5a.1 Sequence Name  K08E7.5a.1
Length (nt)  3951   Chromosome Location  IV: 12573368-12578870
Chromosome . Primary Identifier  IV Chromosome Location . Start  12573368
Chromosome Location . End  12578870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010673 K08E7.5 K08E7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E7.5a K08E7.5a 3816   IV: 12573381-12573579

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E7.5a.1 12573368 12578870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147736   212   IV: 12573368-12573579 Caenorhabditis elegans
Exon147739   231   IV: 12573763-12573993 Caenorhabditis elegans
Exon147744   201   IV: 12574101-12574301 Caenorhabditis elegans
Exon147745   1924   IV: 12574620-12576543 Caenorhabditis elegans
Exon147750   86   IV: 12576754-12576839 Caenorhabditis elegans
Exon147754   101   IV: 12576902-12577002 Caenorhabditis elegans
Exon147759   81   IV: 12577062-12577142 Caenorhabditis elegans
Exon147764   49   IV: 12577186-12577234 Caenorhabditis elegans
Exon147769   91   IV: 12577316-12577406 Caenorhabditis elegans
Exon147774   125   IV: 12577450-12577574 Caenorhabditis elegans
Exon147779   311   IV: 12577628-12577938 Caenorhabditis elegans
Exon147784   135   IV: 12577987-12578121 Caenorhabditis elegans
Exon147789   138   IV: 12578169-12578306 Caenorhabditis elegans
Exon147794   98   IV: 12578552-12578649 Caenorhabditis elegans
Exon147801   168   IV: 12578703-12578870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E7.5a.1 12573368 12578870 1

1 Sequence

Length
3951

1 Sequence Ontology Term

Identifier Name Description
transcript