WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26H9A.2c.1 Sequence Name  C26H9A.2c.1
Length (nt)  10537   Chromosome Location  IV: 12653401-12674762
Chromosome . Primary Identifier  IV Chromosome Location . Start  12653401
Chromosome Location . End  12674762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26H9A.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007752 wdfy-3 C26H9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26H9A.2c C26H9A.2c 10077   IV: 12653489-12653617

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2c.1 12653401 12674762 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147979   217   IV: 12653401-12653617 Caenorhabditis elegans
Exon147986   218   IV: 12653675-12653892 Caenorhabditis elegans
Exon147991   219   IV: 12654495-12654713 Caenorhabditis elegans
Exon147995   133   IV: 12654762-12654894 Caenorhabditis elegans
Exon147999   147   IV: 12655554-12655700 Caenorhabditis elegans
Exon148003   83   IV: 12655751-12655833 Caenorhabditis elegans
Exon148007   202   IV: 12655881-12656082 Caenorhabditis elegans
Exon148011   218   IV: 12656139-12656356 Caenorhabditis elegans
Exon148015   106   IV: 12656878-12656983 Caenorhabditis elegans
Exon148019   250   IV: 12657032-12657281 Caenorhabditis elegans
Exon148023   95   IV: 12657903-12657997 Caenorhabditis elegans
Exon148027   57   IV: 12658052-12658108 Caenorhabditis elegans
Exon148031   246   IV: 12658162-12658407 Caenorhabditis elegans
Exon148035   620   IV: 12658540-12659159 Caenorhabditis elegans
Exon148039   266   IV: 12659597-12659862 Caenorhabditis elegans
Exon148043   287   IV: 12660235-12660521 Caenorhabditis elegans
Exon148047   93   IV: 12660807-12660899 Caenorhabditis elegans
Exon148051   155   IV: 12661163-12661317 Caenorhabditis elegans
Exon148055   136   IV: 12661609-12661744 Caenorhabditis elegans
Exon148059   99   IV: 12661789-12661887 Caenorhabditis elegans
Exon148063   184   IV: 12661935-12662118 Caenorhabditis elegans
Exon148067   343   IV: 12662531-12662873 Caenorhabditis elegans
Exon148071   201   IV: 12662922-12663122 Caenorhabditis elegans
Exon148075   573   IV: 12663603-12664175 Caenorhabditis elegans
Exon148079   389   IV: 12664458-12664846 Caenorhabditis elegans
Exon148083   113   IV: 12665137-12665249 Caenorhabditis elegans
Exon148087   507   IV: 12665296-12665802 Caenorhabditis elegans
Exon148090   904   IV: 12666487-12667390 Caenorhabditis elegans
Exon148093   562   IV: 12667988-12668549 Caenorhabditis elegans
Exon148099   99   IV: 12668604-12668702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2c.1 12653401 12674762 1

1 Sequence

Length
10537

1 Sequence Ontology Term

Identifier Name Description
transcript