WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:JC8.7a.1 Sequence Name  JC8.7a.1
Length (nt)  1223   Chromosome Location  IV: 13247261-13250699
Chromosome . Primary Identifier  IV Chromosome Location . Start  13247261
Chromosome Location . End  13250699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
JC8.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010439 JC8.7 JC8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:JC8.7a JC8.7a 1002   IV: 13247276-13247444

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:JC8.7a.1 13247261 13250699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149882   184   IV: 13247261-13247444 Caenorhabditis elegans
Exon149883   531   IV: 13248181-13248711 Caenorhabditis elegans
Exon149885   182   IV: 13249502-13249683 Caenorhabditis elegans
Exon149888   326   IV: 13250374-13250699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:JC8.7a.1 13247261 13250699 1

1 Sequence

Length
1223

1 Sequence Ontology Term

Identifier Name Description
transcript