WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:JC8.7a Sequence Name  JC8.7a
Length (nt)  1002   Chromosome Location  IV: 13247276-13247444
Chromosome . Primary Identifier  IV Chromosome Location . Start  13247276
Chromosome Location . End  13247444
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
JC8.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17991 JC8.7, isoform a 37.9 333 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00049575
WBRNAi00033796
WBRNAi00082627
WBRNAi00062528

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:JC8.7a 13247276 13247444 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010439 JC8.7 JC8.7 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:JC8.7a 13247276 13247444 1
CDS:JC8.7a 13248181 13248711 1
CDS:JC8.7a 13249502 13249683 1
CDS:JC8.7a 13250374 13250493 1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:JC8.7a.1 JC8.7a.1 1223   IV: 13247261-13250699