WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52G2.2d.1 Sequence Name  F52G2.2d.1
Length (nt)  2616   Chromosome Location  IV: 13522095-13532801
Chromosome . Primary Identifier  IV Chromosome Location . Start  13522095
Chromosome Location . End  13532801 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52G2.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004681 rsd-2 F52G2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52G2.2d F52G2.2d 2616   IV: 13522095-13522130

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52G2.2d.1 13522095 13532801 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150672   36   IV: 13522095-13522130 Caenorhabditis elegans
Exon150677   561   IV: 13522873-13523433 Caenorhabditis elegans
Exon150681   240   IV: 13524357-13524596 Caenorhabditis elegans
Exon150685   177   IV: 13525737-13525913 Caenorhabditis elegans
Exon150689   103   IV: 13525979-13526081 Caenorhabditis elegans
Exon150693   156   IV: 13526134-13526289 Caenorhabditis elegans
Exon150696   109   IV: 13529251-13529359 Caenorhabditis elegans
Exon150699   176   IV: 13529410-13529585 Caenorhabditis elegans
Exon150702   128   IV: 13529636-13529763 Caenorhabditis elegans
Exon150705   106   IV: 13530721-13530826 Caenorhabditis elegans
Exon150708   164   IV: 13530880-13531043 Caenorhabditis elegans
Exon150711   217   IV: 13531629-13531845 Caenorhabditis elegans
Exon150714   279   IV: 13532312-13532590 Caenorhabditis elegans
Exon150715   164   IV: 13532638-13532801 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52G2.2d.1 13522095 13532801 -1

1 Sequence

Length
2616

1 Sequence Ontology Term

Identifier Name Description
transcript