WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0513.9a Sequence Name  B0513.9a
Length (nt)  351   Chromosome Location  IV: 13860449-13860613
Chromosome . Primary Identifier  IV Chromosome Location . Start  13860449
Chromosome Location . End  13860613
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0513.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28426 VAMP-8, isoform a 13.5 116 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00039163

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0513.9a 13860449 13860613 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007200 vamp-8 B0513.9 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0513.9a 13860449 13860613 -1
CDS:B0513.9a 13860662 13860748 -1
CDS:B0513.9a 13861295 13861387 -1
CDS:B0513.9a 13865191 13865196 -1

1 Sequence

Length
351

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0513.9a.1 B0513.9a.1 433   IV: 13860367-13865196