WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.17a.1 Sequence Name  Y37A1B.17a.1
Length (nt)  5069   Chromosome Location  IV: 13964356-13979847
Chromosome . Primary Identifier  IV Chromosome Location . Start  13964356
Chromosome Location . End  13979847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.17a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044989 dnbp-1 Y37A1B.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.17a Y37A1B.17a 4572   IV: 13964845-13965030

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.17a.1 13964356 13979847 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152480   675   IV: 13964356-13965030 Caenorhabditis elegans
Exon152485   122   IV: 13972310-13972431 Caenorhabditis elegans
Exon152488   108   IV: 13972493-13972600 Caenorhabditis elegans
Exon152491   107   IV: 13972652-13972758 Caenorhabditis elegans
Exon152495   1310   IV: 13972808-13974117 Caenorhabditis elegans
Exon152499   204   IV: 13974979-13975182 Caenorhabditis elegans
Exon152501   93   IV: 13975230-13975322 Caenorhabditis elegans
Exon152503   206   IV: 13975379-13975584 Caenorhabditis elegans
Exon152505   148   IV: 13975642-13975789 Caenorhabditis elegans
Exon152507   131   IV: 13975837-13975967 Caenorhabditis elegans
Exon152509   106   IV: 13976020-13976125 Caenorhabditis elegans
Exon152511   150   IV: 13976177-13976326 Caenorhabditis elegans
Exon152513   122   IV: 13976372-13976493 Caenorhabditis elegans
Exon152515   115   IV: 13976547-13976661 Caenorhabditis elegans
Exon152518   465   IV: 13976956-13977420 Caenorhabditis elegans
Exon152520   460   IV: 13977474-13977933 Caenorhabditis elegans
Exon152525   262   IV: 13978720-13978981 Caenorhabditis elegans
Exon152526   89   IV: 13979069-13979157 Caenorhabditis elegans
Exon152529   78   IV: 13979604-13979681 Caenorhabditis elegans
Exon152530   118   IV: 13979730-13979847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.17a.1 13964356 13979847 -1

1 Sequence

Length
5069

1 Sequence Ontology Term

Identifier Name Description
transcript