WormMine: Gene WBGene00049914

• WormBase Gene ID: WBGene00049914
• Gene Name: 21ur-3824
• Sequence Name: LLC1.40
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by olrn-1 based on RNA-seq studies.
• Biotype: SO:0001638
• Genetic Position: IV :12.1181±
• Length (nt): 21

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00049914

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:LLC1.40	LLC1.40	21	IV: 14463329-14463349

Other

0 CDSs

0 RNAi Result

10 Allele

• gk964078
• gk963546
• gk963547
• gk964500
• gk962765
• gk963590
• gk963795
• gk964199
• gk472764
• WBVar01806062

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00049914
• Start: 14463329
• End: 14463349
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly altered expression in olrn-1(ums9) comparing to in N2 animals.	The Ballgown package from the Bioconductor software suite (version 3.8) was used to run a custom R script in R console(R Version 3.5) to analyze the differential gene expression, visualize the data, and perform statistical tests for differential expressionwith multiple test correction. A gene was considered to be differentially regulated if its fold change versus wild-type was greater thantwo, the adjusted p value was less than 0.05, and its RPKM was greater than one.	WBPaper00059567:olrn-1(ums9)_regulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00049914
• Start: 14463329
• End: 14463349
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 21

1 Sequence Ontology Term