WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.24h.1 Sequence Name  Y57G11C.24h.1
Length (nt)  2847   Chromosome Location  IV: 14879484-14896742
Chromosome . Primary Identifier  IV Chromosome Location . Start  14879484
Chromosome Location . End  14896742 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24h Y57G11C.24h 2223   IV: 14879566-14879615

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24h.1 14879484 14896742 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157203   132   IV: 14879484-14879615 Caenorhabditis elegans
Exon157246   131   IV: 14885573-14885703 Caenorhabditis elegans
Exon157258   221   IV: 14886614-14886834 Caenorhabditis elegans
Exon157275   228   IV: 14888379-14888606 Caenorhabditis elegans
Exon157287   124   IV: 14889210-14889333 Caenorhabditis elegans
Exon157312   311   IV: 14891464-14891774 Caenorhabditis elegans
Exon157324   233   IV: 14891833-14892065 Caenorhabditis elegans
Exon157340   178   IV: 14893787-14893964 Caenorhabditis elegans
Exon157347   75   IV: 14894167-14894241 Caenorhabditis elegans
Exon157357   104   IV: 14894341-14894444 Caenorhabditis elegans
Exon157368   316   IV: 14894534-14894849 Caenorhabditis elegans
Exon157380   111   IV: 14894906-14895016 Caenorhabditis elegans
Exon157401   683   IV: 14896060-14896742 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24h.1 14879484 14896742 1

1 Sequence

Length
2847

1 Sequence Ontology Term

Identifier Name Description
transcript