WormMine: Gene WBGene00077720

• WormBase Gene ID: WBGene00077720
• Gene Name: mir-1833
• Sequence Name: Y41E3.214
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by nicotine based on quantitative PCR studies.
• Biotype: SO:0001265
• Genetic Position: IV :12.8114±
• Length (nt): 73

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00077720

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y41E3.214b	Y41E3.214b	23	IV: 15012347-15012369

Other

0 CDSs

8 RNAi Result

• WBRNAi00095786
• WBRNAi00078653
• WBRNAi00009326
• WBRNAi00093120
• WBRNAi00078580
• WBRNAi00026699
• WBRNAi00096887
• WBRNAi00096948

10 Allele

• gk964078
• gk963546
• gk963547
• gk964500
• gk962765
• gk963590
• gk963795
• gk963948
• WBVar01582472
• gk5965

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00077720
• Start: 15012347
• End: 15012419
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	miRNA that showed increased expression after 20mM nicotine treatment	Statistical analysis was based on t-test for independent samples via SPSS. The results were further narrowed based on two criteria. Only the genes whose expression changed with a P < 0.05 and a fold change > 0.5, when compared to control, were considered as differentially expressed. Fold change was calculated as 2**(DeltaCt(treatment)-DeltaCt(control))-1. DeltaCt = Ct(miRNA)-Ct(aveMRNA).	WBPaper00042480:20mM_nicotine_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00077720
• Start: 15012347
• End: 15012419
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 73

1 Sequence Ontology Term