WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105C5B.2a Sequence Name  Y105C5B.2a
Length (nt)  3105   Chromosome Location  IV: 15872960-15873099
Chromosome . Primary Identifier  IV Chromosome Location . Start  15872960
Chromosome Location . End  15873099
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50061 GCY-25, isoform a 117.3 1034 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00055197

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105C5B.2a 15872960 15873099 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001549 gcy-25 Y105C5B.2 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105C5B.2a 15872960 15873099 1
CDS:Y105C5B.2a 15873496 15873681 1
CDS:Y105C5B.2a 15874325 15874415 1
CDS:Y105C5B.2a 15874926 15875073 1
CDS:Y105C5B.2a 15875123 15875231 1
CDS:Y105C5B.2a 15875601 15875769 1
CDS:Y105C5B.2a 15875920 15876213 1
CDS:Y105C5B.2a 15876882 15877223 1
CDS:Y105C5B.2a 15877514 15877585 1
CDS:Y105C5B.2a 15877639 15877818 1
CDS:Y105C5B.2a 15878250 15878436 1
CDS:Y105C5B.2a 15879242 15879400 1
CDS:Y105C5B.2a 15879622 15879799 1
CDS:Y105C5B.2a 15880331 15880474 1
CDS:Y105C5B.2a 15880720 15880843 1
CDS:Y105C5B.2a 15881241 15881414 1
CDS:Y105C5B.2a 15881545 15881654 1
CDS:Y105C5B.2a 15881831 15881984 1
CDS:Y105C5B.2a 15882234 15882377 1

1 Sequence

Length
3105

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105C5B.2a.1 Y105C5B.2a.1 3132   IV: 15872933-15882377