WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y10G11A.3a.1 Sequence Name  Y10G11A.3a.1
Length (nt)  498   Chromosome Location  IV: 16444650-16446741
Chromosome . Primary Identifier  IV Chromosome Location . Start  16444650
Chromosome Location . End  16446741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y10G11A.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012425 dlc-4 Y10G11A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y10G11A.3a Y10G11A.3a 390   IV: 16444700-16444791

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y10G11A.3a.1 16444650 16446741 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon164453   142   IV: 16444650-16444791 Caenorhabditis elegans
Exon164460   191   IV: 16445965-16446155 Caenorhabditis elegans
Exon164465   165   IV: 16446577-16446741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y10G11A.3a.1 16444650 16446741 1

1 Sequence

Length
498

1 Sequence Ontology Term

Identifier Name Description
transcript