WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06A10.1b.2 Sequence Name  T06A10.1b.2
Length (nt)  2807   Chromosome Location  IV: 16855059-16863210
Chromosome . Primary Identifier  IV Chromosome Location . Start  16855059
Chromosome Location . End  16863210 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A10.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020284 mel-46 T06A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06A10.1b T06A10.1b 441   IV: 16855123-16855302

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06A10.1b.2 16855059 16863210 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166111   244   IV: 16855059-16855302 Caenorhabditis elegans
Exon166116   306   IV: 16856052-16856357 Caenorhabditis elegans
Exon166123   1200   IV: 16858330-16859529 Caenorhabditis elegans
Exon166129   424   IV: 16860661-16861084 Caenorhabditis elegans
Exon166135   130   IV: 16861596-16861725 Caenorhabditis elegans
Exon166139   125   IV: 16862392-16862516 Caenorhabditis elegans
Exon166142   139   IV: 16862582-16862720 Caenorhabditis elegans
Exon166145   56   IV: 16862776-16862831 Caenorhabditis elegans
Exon166148   183   IV: 16863028-16863210 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06A10.1b.2 16855059 16863210 -1

1 Sequence

Length
2807

1 Sequence Ontology Term

Identifier Name Description
transcript