WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T06A10.1b Sequence Name  T06A10.1b
Length (nt)  441   Chromosome Location  IV: 16855123-16855302
Chromosome . Primary Identifier  IV Chromosome Location . Start  16855123
Chromosome Location . End  16855302
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A10.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50553 MEL-46, isoform b 16.8 146 Caenorhabditis elegans
 

Other

0 RNAi

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T06A10.1b 16855123 16855302 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020284 mel-46 T06A10.1 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:T06A10.1b 16855123 16855302 -1
CDS:T06A10.1b 16856052 16856312 -1

1 Sequence

Length
441

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06A10.1b.5 T06A10.1b.5 568   IV: 16855042-16856358
Transcript:T06A10.1b.4 T06A10.1b.4 1766   IV: 16855045-16859531
Transcript:T06A10.1b.1 T06A10.1b.1 2915   IV: 16855048-16863481
Transcript:T06A10.1b.3 T06A10.1b.3 2318   IV: 16855052-16861732
Transcript:T06A10.1b.2 T06A10.1b.2 2807   IV: 16855059-16863210