WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116A8C.9a Sequence Name  Y116A8C.9a
Length (nt)  1269   Chromosome Location  IV: 16940445-16940554
Chromosome . Primary Identifier  IV Chromosome Location . Start  16940445
Chromosome Location . End  16940554
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40476 Y116A8C.9, isoform a 47.3 422 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00007414
WBRNAi00055465
WBRNAi00019938
WBRNAi00036618

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.9a 16940445 16940554 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013789 Y116A8C.9 Y116A8C.9 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.9a 16940445 16940554 -1
CDS:Y116A8C.9a 16941045 16941207 -1
CDS:Y116A8C.9a 16942106 16942315 -1
CDS:Y116A8C.9a 16943015 16943110 -1
CDS:Y116A8C.9a 16944084 16944254 -1
CDS:Y116A8C.9a 16944833 16945030 -1
CDS:Y116A8C.9a 16946316 16946412 -1
CDS:Y116A8C.9a 16946474 16946572 -1
CDS:Y116A8C.9a 16946625 16946702 -1
CDS:Y116A8C.9a 16946754 16946800 -1

1 Sequence

Length
1269

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116A8C.9a.1 Y116A8C.9a.1 2498   IV: 16939216-16946800