WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116A8C.35a Sequence Name  Y116A8C.35a
Length (nt)  858   Chromosome Location  IV: 17116887-17117316
Chromosome . Primary Identifier  IV Chromosome Location . Start  17116887
Chromosome Location . End  17117316
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.35a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23341 UAF-2, isoform a 30.8 285 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00095768
WBRNAi00009289
WBRNAi00055453
WBRNAi00075324
WBRNAi00085438
WBRNAi00026597
WBRNAi00064882
WBRNAi00102183
WBRNAi00078043
WBRNAi00107573
WBRNAi00075325
WBRNAi00080043
WBRNAi00080131
WBRNAi00092503
WBRNAi00107255
WBRNAi00107243
WBRNAi00107194
WBRNAi00107160
WBRNAi00107109
WBRNAi00107484
WBRNAi00107454
WBRNAi00107463
WBRNAi00107411
WBRNAi00107325
WBRNAi00107284
WBRNAi00107594
WBRNAi00111155
WBRNAi00108787

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.35a 17116887 17117316 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006698 uaf-2 Y116A8C.35 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.35a 17116887 17117316 -1
CDS:Y116A8C.35a 17118065 17118399 -1
CDS:Y116A8C.35a 17118451 17118543 -1

1 Sequence

Length
858

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116A8C.35a.2 Y116A8C.35a.2 1047   IV: 17116771-17118767
Transcript:Y116A8C.35a.1 Y116A8C.35a.1 983   IV: 17116771-17118552