WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28F3.3 Sequence Name  T28F3.3
Length (nt)  1182   Chromosome Location  IV: 17286077-17286243
Chromosome . Primary Identifier  IV Chromosome Location . Start  17286077
Chromosome Location . End  17286243
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F3.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36329 ZIPT-7.1 43.3 393 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00054433
WBRNAi00099895
WBRNAi00100478
WBRNAi00013925
WBRNAi00019408
WBRNAi00036097
WBRNAi00062731
WBRNAi00062732
WBRNAi00100852
WBRNAi00099693
WBRNAi00099289
WBRNAi00099491
WBRNAi00062389
WBRNAi00100104
WBRNAi00100291
WBRNAi00100665
WBRNAi00101039

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28F3.3 17286077 17286243 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044067 zipt-7.1 T28F3.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28F3.3 17286077 17286243 -1
CDS:T28F3.3 17286290 17286413 -1
CDS:T28F3.3 17286463 17286660 -1
CDS:T28F3.3 17286715 17287083 -1
CDS:T28F3.3 17287129 17287452 -1

1 Sequence

Length
1182

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28F3.3.1 T28F3.3.1 1481   IV: 17285733-17287454
Transcript:T28F3.3.2 T28F3.3.2 1629   IV: 17285733-17288139
Transcript:T28F3.3.3 T28F3.3.3 1518   IV: 17285745-17287456