WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28F3.4a Sequence Name  T28F3.4a
Length (nt)  1722   Chromosome Location  IV: 17288337-17288569
Chromosome . Primary Identifier  IV Chromosome Location . Start  17288337
Chromosome Location . End  17288569
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F3.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32218 SLC-17.4, isoform a 63.4 573 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00054434
WBRNAi00013919
WBRNAi00019409
WBRNAi00036098

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28F3.4a 17288337 17288569 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012130 slc-17.4 T28F3.4 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28F3.4a 17288337 17288569 -1
CDS:T28F3.4a 17288617 17288704 -1
CDS:T28F3.4a 17288750 17288903 -1
CDS:T28F3.4a 17288949 17289039 -1
CDS:T28F3.4a 17289353 17289485 -1
CDS:T28F3.4a 17289529 17289681 -1
CDS:T28F3.4a 17289925 17290058 -1
CDS:T28F3.4a 17290160 17290337 -1
CDS:T28F3.4a 17290673 17290906 -1
CDS:T28F3.4a 17290962 17291033 -1
CDS:T28F3.4a 17291081 17291218 -1
CDS:T28F3.4a 17291401 17291450 -1
CDS:T28F3.4a 17291581 17291644 -1

1 Sequence

Length
1722

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28F3.4a.1 T28F3.4a.1 1948   IV: 17288200-17291733