WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28F3.5a Sequence Name  T28F3.5a
Length (nt)  4839   Chromosome Location  IV: 17294793-17294888
Chromosome . Primary Identifier  IV Chromosome Location . Start  17294793
Chromosome Location . End  17294888
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F3.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48389 T28F3.5, isoform a 180.7 1612 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054435
WBRNAi00013923
WBRNAi00019410

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28F3.5a 17294793 17294888 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012131 T28F3.5 T28F3.5 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28F3.5a 17294793 17294888 1
CDS:T28F3.5a 17294939 17295077 1
CDS:T28F3.5a 17295128 17295349 1
CDS:T28F3.5a 17295412 17295698 1
CDS:T28F3.5a 17295744 17295941 1
CDS:T28F3.5a 17295990 17296291 1
CDS:T28F3.5a 17296337 17296652 1
CDS:T28F3.5a 17296701 17296880 1
CDS:T28F3.5a 17296931 17297185 1
CDS:T28F3.5a 17297238 17297335 1
CDS:T28F3.5a 17297383 17298253 1
CDS:T28F3.5a 17298298 17298437 1
CDS:T28F3.5a 17298485 17298839 1
CDS:T28F3.5a 17298891 17299100 1
CDS:T28F3.5a 17299146 17299364 1
CDS:T28F3.5a 17299417 17299678 1
CDS:T28F3.5a 17299729 17300145 1
CDS:T28F3.5a 17300217 17300488 1

1 Sequence

Length
4839

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28F3.5a.1 T28F3.5a.1 4843   IV: 17294789-17300488